NEWS
paar 1.0.2.9000
- Fixed: in
spca_summary_results, the Prop column of kmspc() was a
proportion between 0 and 1 while Acum. Prop. in the same table was a
percentage between 0 and 100. spca_biplot() formats Prop with a per-cent
sign, so the axis labels reported one hundredth of the explained variability,
for example CS1 (0.5%) where the axis actually explains 50.6%. Both columns
are now percentages. The denominator is the total inertia of the analysis
rather than the number of retained eigenvalues, which differ when the data
matrix is rank deficient. The selection of components from
explainedVariance is unaffected, as it already operated on the cumulative
percentage. The Prop and Acum. Prop. columns of the classical PCA summary
returned by only_spca_results = FALSE were also proportions and are now
percentages, so that both tables can be read side by side.
- Fixed:
kmspc() computed the spatial PCA results but discarded them unless
all_results = TRUE. With the default arguments pca_results came back
empty, even though only_spca_results = TRUE is meant to return precisely
those results. The spatial PCA summary and the loadings are now always
returned.
kmspc() also returns scores, the site coordinates on the retained
spatial components. These are the values the clustering step operates on and
were previously computed but not exposed.
- New
spca_biplot(), which draws a biplot of the spatial PCA from a
kmspc() result, optionally colouring the sites by one of the computed
classifications.
paar 1.0.2 (2026-03-19)
- Help pages were revised for clarity, consistency, and improved user guidance #21
- Now Summary index is calculated correctly.
- PCA results can be obtained within kmspc function.
- Factor recoding.
paar 1.0.1 (2024-07-30)
paar 1.0.0
- Prepare for CRAN submission.
paar 0.0.0.9003
- Now
depurate function allows to use MULTIPOLYGON objects.
- Build vignette for
kmspc function.
- Build vignette for
depurate function.
- New
cbind.paar function to bind the condition of one paar object with a
data.frame or sf object.
- Changed
summary.paar removing the print function.
- Added
print.summary.paar function to print the summary of a paar object.
- Fixed check for
kmspc variables
- Typos fixed in errors from
depurate function.
paar 0.0.0.9002
- Several changes were made.
paar 0.0.0.9001
paar 0.0.0.9000
- Added a
NEWS.md file to track changes to the package.